Publications EEP 2015-

Evo-Eco-Paléo 2015-

in press  2022 2021   2020   2019   2018   2017   2016   2015  

 

in press

2022

van Rossum, F. & Godé, C. (2022) Development of highly polymorphic microsatellite markers for Campanula glomerata L. ( Campanulaceae ). . Molecular Biology Reports., 49: 805-810

de Manincor, N., Andreu, B., Buatois, B., Lou Chao, H., Hautekèete, N., Massol, F., Piquot, Y., Schatz, B., Schmitt, E. & Dufay, M. (2022) Geographical variation of floral scents in generalist entomophilous species with variable pollinator communities. . Functional Ecology, 36: 763-778

Moquet, L., Jacquemart, A.L., Dufay, M. & De Cauwer, I. (2022) Effects of sexual dimorphism on pollinator behaviour in a dioecious species. . Oikos, 2022: e08662

Joffard, N., Olofsson, C., Friberg, M. & Sletvold, N. (2022) Extensive pollinator sharing does not promote character displacement in two orchid congeners. . Evolution, 76: 749-764

Charbonnel, E., Daguin-Thiébaut, C., Caradec, L., Moittié, E., Gilg, O., Gavrilo, M. V., Strøm, H., Mallory, M.L., Morrison, R.I.G., Gilchrist, H.G., Leblois, R., Roux, C., Yearsley, J.M., Yannic, G. & Broquet, T. (2022) Searching for genetic evidence of demographic decline in an arctic seabird: beware of overlapping generations. . Heredity, in press: nan

Postel, Z., Poux, C., Gallina, S., Varré, J.S., Godé, C., Schmitt, E., Meyer, E., Van Rossum, F. & Touzet, P. (2022) Reproductive isolation among lineages of Silene nutans (Caryophyllaceae): A potential involvement of plastid-nuclear incompatibilities.. Molecular Phylogenetics and Evolution, 169: 107436

Dubart, M., Alonso, P., Barroso-Bergada, D., Becker, N., Bethune, K., Bohan, D.A., Boury, C., Cambon, M., Canard, E., Chancerel, E., Chiquet, J., David, P., de Manincor, N., Donnet, S., Duputié, A., Facon, B., Guichoux, E., Le Minh, T., Ortiz-Martínez, S., Piouceau, L., Sacco-Martret de Préville, A., Plantegenest, M., Poux, C., Ravigné, V., Robin, S., Trillat, M., Vacher, C., Vernière, C. & Massol, F. (2022) Coupling ecological network analysis with high-throughput sequencing-based surveys: Lessons from the next-generation biomonitoring project. . Advances in Ecological Research, 65: 367–430

Van Rossum, F., Le Pajolec, S., Raspé, O. & Godé, C. (2022) Assessing population genetic status for designing plant translocations. . Frontiers in Conservation Science, 3: 829332

Silva, R.R., Martello, F., Feitosa, R.M., Silva, O.G.M., do Prado, L.P., many others, Ortiz-Sepulveda, C.M., many others, & Ribeiro, M.C. (2022) ATLANTIC ANTS: a data set of ants in Atlantic Forests of South America.. Ecology, 103: e03580

Pérez, D., Duputié, A., Vernière, C., Szurek, B. & Caillon, S. (2022) Biocultural drivers responsible for the occurrence of a cassava bacterial pathogen in small-scale farms of Colombian Caribbean.. Frontiers in Ecology and Evolution, 10: 841915

2021

Massol, F; Macke, E; Callens, M; Decaestecker, E. (2021) A methodological framework to analyse determinants of host–microbiota networks, with an application to the relationships between Daphnia magna‘s gut microbiota and bacterioplankton. Journal of Animal Ecology, 90: 102-119

Van Bocxlaer, B; Clewing, C; Duputié, A; Roux, C; Albrecht, C. (2021) Population Collapse in Viviparid Gastropods of the Lake Victoria Ecoregion Started before the Last Glacial Maximum. Molecular Ecology, 30: 364-378

Mariotti, R., Pandolfi, S., De Cauwer, I., Saumitou-Laprade, P., Vernet, P., Rossi, M., Baglivo, F., Baldoni, L. & Mousavi, S. (2021) Diallelic self‐incompatibility is the main determinant of fertilization patterns in olive orchards. Evolutionary Applications, 2021: 983-995

Muyle, Aline; Martin, Hélène; Zemp, Niklaus; Mollion, Maéva; Gallina, Sophie; Tavares, Raquel; Silva, Alexandre; Bataillon, Thomas; Widmer, Alex; Glémin, Sylvain; Touzet, Pascal; Marais, Gabriel A B. (2021) Dioecy is associated with high genetic diversity and adaptation rates in the plant genus Silene. Molecular Biology and Evolution, 38: 805-818

Lepers, C., Billiard, S., Porte, M., Méléard, S., & Tran, V. C. (2021) Inference with selection, varying population size and evolving population structure: Application of ABC to a forward-backward coalescent process with interactions. Heredity, 126: 335-350 Fraïsse, C., Popovic, I., Mazoyer, C., Spataro, B., Delmotte, S., Romiguier, J., Loire, É., Simon, A., Galtier, N., Duret, L., Bierne, N., Vekemans, X. & Roux, C. (2021) DILS: Demographic inferences with linked selection by using ABC. . Molecular Ecology Resources, population coll: nan

Fritsch, C., Billiard, S. & Champagnat, N. (2021) Identifying conversion efficiency as a key mechanism underlying food webs adaptive evolution: a step forward, or backward?. Oikos, 130: 904-930

Vanderplanck, M., Lapeyre, B., Brondani, M., Opsommer, M., Dufay, M., Hossaert-Mckey, M. & Proffit, M. (2021) Ozone pollution alters olfaction and behavior of pollinators.. Antioxidants, 10: 1-16

Lesaffre, T. & Billiard, S. (2021) On deleterious mutations in perennials: Inbreeding depression, mutation load, and life-history evolution. . The American Naturalist, 197: E143-E145

Takou, M., Hämälä, T., Koch, E.M., Steige, K.A., Dittberner, H., Yant, L., Genete, M., Sunyaev, S., Castric, V., Vekemans, X., Savolainen, O. & de Meaux, J. (2021) Maintenance of Adaptive Dynamics and No Detectable Load in a Range-Edge Outcrossing Plant Population.. Molecular Biology and Evolution, 38: 1820

Fraïsse, C. & Sachdeva, H. (2021) The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes.. Genetics, 217: iyaa025

Vekemans, X., Castric, V., Hipperson, H., Müller, N. A., Westerdahl, H., Cronk, Q. (2021) Whole‐genome sequencing and genome regions of special interest: Lessons from major histocompatibility complex, sex determination, and plant self‐incompatibility. . Molecular Ecology, 30: 6072-6086

Facon, B., Hafsi, A., Charlery de la Masselière, M., Robin, S., Massol, F., Dubart, M., Chiquet, J., Frago, E., Chiroleu, F., Duyck, P. F. & Ravigné, V (2021) Joint species distributions reveal the combined effects of host plants, abiotic factors and species competition as drivers of species abundances in fruit flies. . Ecology Letters, 24: 1905-1916

Hourdez, S., Boidin-Wichlacz, C., Jollivet, D., Massol, F., Rayol, M.C., Bruno, R., Zeppilli, D., Thomas, F., Lesven, L., Billon, G., Duperron, S. & Tasiemski, A. (2021) Investigation of Capitella spp. symbionts in the context of varying anthropic pressures: First occurrence of a transient advantageous epibiosis with the giant bacteria Thiomargarita sp. to survive seasonal increases of sulfides in sediments.. Science of the Total Environment, 798: 149149

Mahulu, A., Stelbrink, B., Van Bocxlaer, B., Riedel, F. & Albrecht, C. (2021) Going with the flow? Diversification of gastropods reflects drainage evolution in Africa. . Journal of Biogeography, 48: 1579-1593

Koudenoukpo, Z.C., Odountan, O.H., Agboho, P.A., Dalu, T., Van Bocxlaer, B., Janssens de Bistoven, L., Chikou, A. & Backeljau, T. (2021) Using self–organizing maps and machine learning models to assess mollusc community structure in relation to physicochemical variables in a West Africa river–estuary system. . Ecological Indicators, 126: 107706

Billiard, S., Castric, V. & Llaurens, V. (2021) The integrative biology of genetic dominance.. Biological Reviews, 96: 2925-2942

Hammoud, C., Mulero, S., Van Bocxlaer, B., Boissier, J., Verschuren, D., Albrecht, C. & Huyse, T. (2021) Simultaneous genotyping of snails and infecting trematode parasites using high-throughput amplicon sequencing. . Molecular Ecology Resources, 22: 567-586

Lesaffre, T. (2021) Population-level consequences of inheritable somatic mutations and the evolution of mutation rates in plants. Proceedings of the Royal Society B: Biological Sciences, 288: nan

Libourel, C., Baron, E., Lenglet, J., Amsellem, L., Roby, D., Roux, F. (2021) The genomic architecture of competitive response of Arabidopsis thaliana is highly flexible among plurispecific neighborhoods. . Frontiers in Plant Science., 12: 741122

De Cauwer, I., Vernet, P., Billiard, S., Godé, C., Bourceaux, A., Ponitzki, C. & Saumitou-Laprade, P. (2021) Widespread coexistence of self-compatible and self-incompatible phenotypes in a diallelic self-incompatibility system in Ligustrum vulgare (Oleaceae). . Heredity, 127: 384-392

Le Moan, A., Roby, C., Fraïsse, C., Daguin‐Thiébaut, C., Bierne, N. & Viard, F. (2021) An introgression breakthrough left by an anthropogenic contact between two ascidians. . Molecular Ecology, 30: 6718-6732

Boidin-Wichlacz, C., Jollivet, D., Papot, C., Roisin, L., Massol, F. & Tasiemski, A. (2021) Genetic diversification and life‑cycle of the polychaete Capitella spp. from the English Channel: evidence for sympatric cryptic species and alternative reproductive strategies. Marine Biology, 168: 168-176

Le Roy, C., Roux, C., Authier, E., Parrinello, H., Bastide, H., Debat, V. & Llaurens, V. (2021) Convergent morphology and divergent phenology promote the coexistence of Morpho butterfly species. . Nature Communications, 12: 7248

Fraïsse, C., Haguenauer, A., Gérard, K., Anh-Thu Weber, A., Bierne, N. & Chenuil, A. (2021) Fine-grained habitat-associated genetic connectivity in an admixed population of mussels in the small isolated Kerguelen Islands. Peer Community Journal, 1: e10

Carré, A., Gallina, S., Santoni, S., Vernet, P., Godé, C., Castric, V. & Saumitou‐Laprade, P. (2021) Genetic mapping of sex and self-incompatibility determinants in the androdioecious plant Phillyrea angustifolia. Peer Community Journal, 1: e15

2020

Billiard, S. & Smadi, C. (2020) Stochastic dynamics of three competing clones: Conditions and times for invasion, coexistence, and fixation. The American Naturalist, 195: 463-484

Billiard, S., Derex, M., Maisonneuve, L. & Rey, T. (2020) Convergence of knowledge in a stochastic cultural evolution model with population structure , social learning and credibility biases. Mathematical Models and Methods in Applied Sciences, in press: nan

Bruno, Renato; Maresca, Marc; Canaan, Stéphane; Cavalier, Jean-François; Mabrouk, Kamel; Boidin-Wichlacz, Céline; Olleik, Hamza; Zeppilli, Daniela; Brodin, Priscille; Massol, François; Jollivet, Didier; Jung, Sascha; Tasiemski, Aurélie A. (2020) Worms’ Antimicrobial Peptides. Marine Drugs, 17: 512

Burghgraeve, N., Simon, S., Barral, S., Fobis-Loisy, I., Holl, A.C., Poniztki, C., Schmitt, E., Vekemans, X. & Castric, V. (2020) Base-pairing requirements for small RNA-mediated gene silencing of recessive self-incompatibility alleles in Arabidopsis halleri. Genetics, 215: 653-664

Cuvillier-Hot, V; Lenoir, A. (2020) Invertebrates facing environmental contamination by endocrine disruptors: Novel evidences and recent insights. Molecular and Cellular Endocrinology, 504: 110712

de Manincor, N., Hautekèete, N., Mazoyer, C., Moreau, P., Piquot, Y., Schatz, B., Schmitt, E., Zélazny, M. & Massol, F. (2020) How biased is our perception of plant-pollinator networks? A comparison of visit- and pollen-based representations of the same networks. Acta Oecologica, 105: 103551

de Manincor, N., Hautekeete, N., Piquot, Y., Schatz, B., Vanappelghem, C. & Massol, F. (2020) Does phenology explain plant–pollinator interactions at different latitudes? An assessment of its explanatory power in plant–hoverfly networks in French calcareous grasslands. Oikos, 129: 753-765

Durand, E; Chantreau, M; Le Veve, A; Stetsenko, R; Dubin, M; Genete, M; Llaurens, V; Poux, C; Roux, C; Billiard, S; Vekemans, X; Castric, V (2020) Evolution of self-incompatibility in the Brassicaceae: Lessons from a textbook example of natural selection. Evolutionary Applications, 13: nan

Fisogni, A., Hautekèete, N., Piquot, Y., Brun, M., Vanappelghem, C., Michez, D., & Massol, F. (2020) Urbanization drives an early spring for plants but not for pollinators. Oikos, 129: None

Genete, Mathieu; Castric, Vincent; Vekemans, Xavier. (2020) Genotyping and de novo discovery of allelic variants at the Brassicaceae self-incompatibility locus from short read sequencing data. Molecular Biology and Evolution, 37: 1193-1201

Latron, Mathilde; Arnaud, Jean-François; Ferla, Héloïse; Godé, Cécile; Duputié, Anne. (2020) Effects of contemporary shifts of range margins on patterns of genetic structure and mating system in two coastal plant species. Heredity, 124: 336-350 Lesaffre, T. & Billiard, S. (2020) The joint evolution of lifespan and self-fertilization. Journal of Evolutionary Biology, 33: 41-56

Massol, F; Macke, E; Callens, M; Decaestecker, E. (2020) A methodological framework to analyse determinants of host–microbiota networks, with an application to the relationships between Daphnia magna‘s gut microbiota and bacterioplankton. Journal of Animal Ecology, in press: nan

Ortiz-Sepulveda, C.M., Stelbrink, B., Vekemans, X., Albrecht, C., Riedel, F., Todd, J.A. & Van Bocxlaer, B. (2020) Diversification dynamics of freshwater bivalves (Unionidae: Parreysiinae: Coelaturini) indicate historic hydrographic connections throughout the East African Rift System. Molecular Phylogenetics and Evolution, 148: 106816

Postel, Z; Touzet, P (2020) Cytonuclear genetic incompatibilities in plant speciation. Plants, 9: 487

Van Bocxlaer, B; Ortiz-Sepulveda, C. M; Gurdebeke, P. R; Vekemans, X (2020) Adaptive divergence in shell morphology in an ongoing gastropod radiation from Lake Malawi. BMC Evolutionary Biology, 20: 5

Vanderplanck, M; Touzet, P; Van Rossum, F; Lahiani, E; De Cauwer, I; Dufaÿ, M (2020) Does pollination syndrome reflect pollinator efficiency in Silene nutans?. Acta Oecologica, 105: 103557

Vanderplanck, M; Zerck, P.-L; Lognay, G; Michez, D. (2020) Sterol addition during pollen collection by bees: another possible strategy to balance nutrient deficiencies?. Apidologie, 207: nan

Azibi, T; Hadj-Arab, H; Lodé, M; Ferreira de Carvalho, J; Trotoux, G; Nègre, S; Gilet, M.-M; Boutte, J; Lucas, J; Vekemans, X; Chèvre, A.-M; Rousseau-Gueutin, M. (2020) Impact of whole genome triplication on the evolutionary history and the functional dynamics of regulatory genes involved in Brassica self‑incompatibility signalling pathway. Plant Reproduction, 33: 43-58

Hartmann, F.E., Snirc, A., Cornille, A., Godé, C., Touzet, P., Van Rossum, F., Fournier, E., Le Prieur, S., Shykoff, J. & Giraud, T. (2020) Congruent population genetic structures and divergence histories in anther-smut fungi and their host plants Silene italica and the Silene nutans species complex. Molecular Ecology, 29: 1154-1172 Jacquot, Maxime; Massol, François; Muru, David; Derepas, Brice; Tixier, Philippe; Deguine, Jean-Philippe. (2020) Arthropod diversity is governed by bottom-up and top-down forces in a tropical agroecosystem. Agriculture, Ecosystems and Environment, 285: 106623

Le Bloa, Simon; Boidin-Wichlacz, Céline; Cueff-Gauchard, Valérie; Rosa, Rafael Diego; Cuvillier-Hot, Virginie; Durand, Lucile; Methou, Pierre; Pradillon, Florence; Cambon-Bonavita, Marie Anne; Tasiemski, Aurélie. (2020) Antimicrobial Peptides and Ectosymbiotic Relationships: Involvement of a Novel Type IIa Crustin in the Life Cycle of a Deep-Sea Vent Shrimp. Frontiers in Immunology, 11: None

Makiola, A; Compson, Z. G; Baird, D. J; Barnes, M. A; Boerlijst, S. P; Bouchez, A; Brennan, G; Bush, A; Canard, E; Cordier, T; Créer, S; Curry, R.A; David, P; Dumbrell, A.J; Gravel, D; Hajibabaei, M; Hayden, B; vander Hoorn, B; Jarne, P; Jones, J. I; Karimi, B; Keck, F; Kelly, M; Knot, I. E; Krol, L; Massol, F; Monk, W.A; Murphy, J; Pawlowski, J; Poisot, T; Porter, T. M; Randall, K. C; Ransome, E; Ravigné, V; Raybould, A; Robin, S; Schrama, M; Schatz, B; Tamaddoni-Nezhad, A; Trimbos, K.B; Vacher, C; Vasselon, V; Wood, S; Woodward, G; Bohan, D. A. (2020) Key Questions for Next-Generation Biomonitoring. Frontiers in Environmental Science, 7: 197

Mariotti, R., Fornasiero, A., Mousavi, S., Cultrera, N. G. M., Brizioli, F., Pandolfi, S., Passeri, V. Rossi, M., Magris, G., Scalabrin, S. Scaglione, D., Di Gaspero, G., Saumitou-Laprade, P., Vernet, P., Alagna, F., Morgante, M. & Baldoni, L. (2020) Genetic Mapping of the Incompatibility Locus in Olive and Development of a Linked Sequence-Tagged Site Marker. Frontiers in Plant Science, 10: 1760

McGill, Brian J.; Chase, Jonathan M.; Hortal, Joaquín Overcast, Isaac; Rominger, Andrew J.; Rosindell, James; Borges, Paulo A.V.; Emerson, Brent C.; Etienne, Rampal; Hickerson, Michael J.; Mahler, D. Luke; Massol, Francois; McGaughran, Angela; Neves, Pedro; Parent, Christine; Patiño, Jairo; Ruffley, Megan; Wagner, Catherine E.; Gillespie, Rosemary. (2020) Unifying macroecology and macroevolution to answer fundamental questions about biodiversity. Global Ecology and Biogeography, 28: 1925-1936

Rozier, F., Riglet, L., Kodera, C., Bayle, V., Durand, E., Schnabel, J., Gaude, T. & Fobis-Loisy, I. (2020) Live-cell imaging of early events following pollen perception in self-incompatible Arabidopsis thaliana. Journal of Experimental Botany, 71: 2513-2526

Vanderplanck, Maryse; Zerck, Pierre-Laurent; Lognay, Georges; Michez, Denis. (2020) Generalized host-plant feeding can hide sterol-specialized foraging behaviors in bee-plant interactions. Ecology and Evolution, 10: 150-162

Moquet, L., Lateur, L., Jacquemart, A.L., De Cauwer, I. & Dufay, M. (2020) Temporal dynamics of sexual dimorphism in a dioecious species. . Annals of Botany, 126: 471-480

Sukhikh, N., Abramova, E., Holl, A.-C., Souissi, S. & Alekseev, V. (2020) A comparative analysis of genetic differentiation of the E. affinis species complex and some other Eurytemora species, using the CO1, nITS and 18SrRNA genes (Copepoda, Calanoida). Crustaceana, 93: 931–955

Jabot, F., Laroche, F., Massol, F., Arthaud, F., Crabot, J., Dubart, M., Blanchet, S., Munoz, F., David, P. & Datry, T. (2020) Assessing metacommunity processes through signatures in spatiotemporal turnover of community composition.. Ecology Letters, 23: 1330-1339

2019

Pauwels, M; Cuvelier, J (2019) La « sixième extinction » aura-t-elle lieu ? . The Conversation, nan: 2019-07-03 00:00:00

Bernier, C; Boidin-Wichlacz, C; Tasiemski, A; Hautekèete, N; Massol, F; Cuvillier-Hot, V (2019) Transgenerational immune priming in the field: Maternal environmental experience leads to differential immune transfer to oocytes in the marine annelid Hediste diversicolor. Genes, 10: 989

Brom, Thomas; Castric, Vincent; Billiard, Sylvain. (2019) Breakdown of gametophytic self-incompatibility in subdivided populations. Evolution, 74: 270-282

Chantreau, M., Poux, C., Lensink, M. F., Brysbaert, G., Vekemans, X., & Castric, V. (2019) Asymmetrical diversification of the receptor-ligand interaction controlling self-incompatibility in Arabidopsis. eLife, 8: e50253

Chantreau, Maxime; Poux, Céline; Lensink, Marc F; Brysbaert, Guillaume; Vekemans, Xavier; Castric, Vincent. (2019) Asymmetrical diversification of the receptor-ligand interaction controlling self-incompatibility in Arabidopsis. eLife, 8: e50253

Durand, É; Gagnon-Arsenault, I; Hallin, J; Hatin, I; Dubé, A.K; Nielly-Thibault, L; Namy, O.; Landry, C.R. (2019) Turnover of ribosome-associated transcripts from de novo ORFs produces gene-like characteristics available for de novo gene emergence in wild yeast populations. . Genome Research, 29: 932-943

Karam, M.-J; Aouad, M; Roig, A; Bile, A; Dagher-Kharrat, M.B; Klein, E.K; Fady, B.; Lefèvre, F. (2019) Characterizing the genetic diversity of Atlas cedar and phylogeny of Mediterranean Cedrus species with a new multiplex of 16 SSR markers.. Tree Genetics; Genomes, 15: 60

Legrand, S; Caron, T; Maumus, F; Schvartzman, S; Quadrana, L; Durand, E; Gallina, S; Pauwels, M; Mazoyer, C; Huyghe, L; Colot, V; Hanikenne, M.; Castric, V (2019) Differential retention of transposable element-derived sequences in outcrossing Arabidopsis genomes. Mobile DNA, 10: 30

Martin, H; Carpentier, F; Gallina, S; Godé, C; Schmitt, E; Muyle, A; Marais, G.A.B.; Touzet, P (2019) Evolution of young sex chromosomes in two dioecious sister plant species with distinct sex determination systems. Genome Biology and Evolution, 11: 350-361

Ortiz-Sepulveda C.M; Van Bocxlaer B; Meneses A.D; Fernández F. (2019) Molecular and morphological recognition of species boundaries in the neglected ant genus Brachymyrmex (Hymenoptera: Formicidae): toward a taxonomic revision.. Organisms Diversity; Evolution, 19(3): 447-552

Roux, Camille; Pannell, John R. (2019) The opposing effects of genetic drift and Haldaneӳ sieve on floral-morph frequencies in tristylous metapopulations. The New Phytologist, 224: 1229-1240

Vanderplanck, M; Roger, N; Moerman, R; Ghisbain, G; Gérard, M; Popowski, D; Granica, S; Fournier, D; Meeus, I; Piot, N; Smagghe, G; Terrana, L.; Michez, D. (2019) Bumble bee parasite prevalence but not genetic diversity impacted by the invasive plant Impatiens glandulifera. Ecosphere, 10: e02804

Bachmann, J.A.; Tedder, A; Laenen, B; Fracassetti, M.; Désamoré, A; Lafon-Placette, C.; Steige, K.; Callot, C.; Marande, W.; Neuffer, B.; Bergès, H.; Köhler, C.; Castric, V; Slotte, T. (2019) Genetic basis and timing of a major mating system shift in Capsella. New Phytologist, 224: 505-517

Bahrman, N; Hascoët, E; Jaminon, O; Dépta, F; Hü, J.F.; Bouchez, O. Lejeune-Henaut, I.; Delbreil, B.; Legrand, S (2019) Identification of genes differentially expressed in response to cold in Pisum sativum using RNA sequencing analyses. Plants, 8(8): 288

Bellec, L; Bonavita, M. A. C; Hourdez, S; Jebbar, M; Tasiemski, A; Durand, L; Gayet N; Zeppilli, D. (2019) Chemosynthetic ectosymbionts associated with a shallow-water marine nematode.. Scientific Reports, 9: 1-14

Corbett-Detig, R; Medina, P; Frérot, H; Blassiau, C; Castric, V. (2019) Bulk pollen sequencing reveals rapid evolution of segregation distortion in the male germline of Arabidopsis hybrids.. Evolution Letters, 3: 93-103

Frachon, L; Mayjonade, B; Bartoli, C; Hautekèete, N.-C; Roux, F. (2019) Adaptation to plant communities across the genome of Arabidopsis thaliana. Molecular Biology and Evolution. Molecular Biology and Evolution, 36: 1442-1556

Giraudeau, M; Sepp, T; Ujvari, B; Renaud, F; Tasiemski, A; Roche, B; Capp, J.-P.; Thomas, F. (2019) Differences in mutational processes and intratumour heterogeneity between organs: the local selective filter hypothesis. Evolution, Medicine, and Public Health, 1: 136-146

Guigon, I; Legrand, S; Berthelot, J.-F; Bini, S; Lanselle, D; Benmounah, M.; Touzet, H. (2019) miRkwood: a tool for the reliable identification of microRNAs in plant genomes. . BMC Genomics, 20: 532

Joffard, Nina; Massol, François; Grenié, Matthias; Montgelard, Claudine; Schatz, Bertrand. (2019) Effect of pollination strategy, phylogeny and distribution on pollination niches of Euro-Mediterranean orchids. Journal of Ecology, 107: 478-490

Joffard, Nina; Massol, François; Grenié, Matthias; Montgelard, Claudine; Schatz, Bertrand. (2019) Effect of pollination strategy, phylogeny and distribution on pollination niches of Euro-Mediterranean orchids. . Journal of Ecology, 107: 478-490

Legrand, P; Vanderplanck, M; Marko, I; Gillard, L; Lognay, G; Lorge, S; Maesen, P; Vilcinskas, A; Vogel, H; Foucaud, J; Estoup, A; Francis, F; Facon, B.; Verheggen, F. J. (2019) The taste of origin in a lady beetle: do males discriminate between females based on cuticular hydrocarbons?. Physiological Entomology, 44: 160-168

Schmidt, K. A.; Massol, F. (2019) Habitat selection and the value of information in heterogenous landscapes.. Oikos, 128: 457-467

Schmidt, Kenneth A; Massol, François (2019) Habitat selection and the value of information in heterogenous landscapes. Oikos, 128: 457-467

Sukhikh, Natalia; Souissi, Anissa; Souissi, Sami; Holl, Anne-Catherine; Schizas, Nikolaos V; Alekseev, Victor. (2019) Life in sympatry: coexistence of native Eurytemora affinis and invasive Eurytemora carolleeae in the Gulf of Finland (Baltic Sea). Oceanologia, 61: 227-238

Termaat, T; van Strien, A.J; van Grunsven, R.H.A; De Knijf, G; Bjelke, U; Burbach, K; Conze, K.J; Goffart, P; Hepper, D; Kalkman, V.J; Motte, G; Prins, M.D; Prunier, F; Sparrow, D; van den Top, G; Vanappelghem, C; Winterholler, M.; Wallisdevries, M. (2019) Distribution trends of European dragonflies under climate change.. Diversity and Distributions, 25: 936:950

Tissot, Tazzio; Massol, François; Ujvari, Beata; Alix-Panabieres, Catherine; Loeuille, Nicolas; Thomas, Frédéric. (2019) Metastasis and the evolution of dispersal. Proceedings of the Royal Society Series B, 286: 20192186

Dieleman, J., Van Bocxlaer, B., Nyingi, W.D., Lyaruu, A. & Verschuren, D. (2019) Recurrent changes in cichlid dentition linked to climate-driven lake-level fluctuations. . Ecosphere, 10: 4

Sun, J., Mu, H., Ip, J.C.H., Li, R., Xu, T., Accorsi, A., Alvarado, A.S., Ross, E., Lan, Y., Sun, Y., Castro-Vazquez, A., Vega, I.A., Heras, H., Ituarte, S., Van Bocxlaer, B., Hayes, K.A., Cowie, R.H., Zhao, Z., Zhang, Y., Qian, P.Y. & Qiu, J.W. (2019) Signatures of divergence, invasiveness, and terrestrialization revealed by four apple snail genomes. . Molecular Biology and Evolution, 36: 1507-1520

2018

Billiard, Sylvain; Alvergne, Alexandra. (2018) Stochasticity in cultural evolution: a revolution yet to happen. History and Philosophy of the Life Sciences, 40: 9

Billiard, Sylvain; Bansaye, Vincent; Chazottes, J.-R.. (2018) Rejuvenating functional responses with the renewal theory. Journal of The Royal Society Interface, 15: 20180239

Brom, Thomas; Massot, Manuel; Laloi, David. (2018) The sex chromosome system can influence the evolution of sex-biased dispersal. Journal of Evolutionary Biology, 31: 1377-1385

Cuvillier-Hot, Virginie; Gaudron, Sylvie Marylène; Massol, François; Boidin-Wichlacz, Céline; Pennel, Timothée; Lesven, Ludovic; Net, Sopheak; Papot, Claire; Ravaux, Juliette; Vekemans, Xavier; Billon, Gabriel; Tasiemski, Aurélie (2018) Immune failure reveals vulnerability of populations exposed to pollution in the bioindicator species Hediste diversicolor. Science of the Total Environment, 613-614: 1527-1542

Dubin, Manu J; Mittelsten Scheid, Ortrun; Becker, Claude. (2018) Transposons: a blessing curse. Current Opinion in Plant Biology, 42: 23-29

Fisogni, Alessandro; Quaranta, Marino; Grillenzoni, Francesca Vittoria; Corvucci, Francesca; de Manincor, Natasha; Bogo, Gherardo; Bortolotti, Laura; Galloni, Marta. (2018) Pollen load diversity and foraging niche overlap in a pollinator community of the rare Dictamnus albus L.. Arthropod-Plant Interactions, 12: 191-200

Frérot, Hélène; Hautekèete, Nina Coralie; Decombeix, Isabelle; Bouchet, Marie Hélène; Créach, Anne; Saumitou-Laprade, Pierre; Piquot, Yves; Pauwels, Maxime (2018) Habitat heterogeneity in the pseudometallophyte Arabidopsis halleri and its structuring effect on natural variation of zinc and cadmium hyperaccumulation. Plant and Soil, 423: 157-174

Latron, Mathilde; Arnaud, Jean-François; Ferla, Héloïse; Godé, Cécile; Duputié, Anne (2018) Polymorphic nuclear markers for coastal plant species with dynamic geographic distributions, the rock samphire (Crithmum maritimum) and the vulnerable dune pansy (Viola tricolor subsp. curtisii). Molecular Biology Reports, 45: 203-209

Nowak, Julien; Frérot, Hélène; Faure, Nathalie; Glorieux, Cédric; Liné, Clarisse; Pourrut, Bertrand; Pauwels, Maxime (2018) Can zinc pollution promote adaptive evolution in plants? Insights from a one-generation selection experiment. Journal of Experimental Botany, 69: 5561-5572

Saumitou-Laprade, Pierre; Vernet, Philippe; Dowkiw, Arnaud; Bertrand, Sylvain; Billiard, Sylvain; Albert, Béatrice; Gouyon, Pierre-Henri; Dufaÿ, Mathilde (2018) Polygamy or subdioecy? The impact of diallelic self-incompatibility on the sexual system in Fraxinus excelsior (Oleaceae). Proceedings of the Royal Society – Series B, 285: 20180004

Touzet, Pascal; Villain, Sarah; Buret, Laetitia; Martin, Hélène; Holl, Anne-Catherine; Poux, Céline; Cuguen, Joël (2018) Chloroplastic and nuclear diversity of wild beets at a large geographical scale: Insights into the evolutionary history of the Beta section. Ecology and Evolution, 8: 2890-2900

Voinson, Marina; Alvergne, Alexandra; Billiard, Sylvain; Smadi, Charline. (2018) Stochastic dynamics of an epidemic with recurrent spillovers from an endemic reservoir. Journal of Theoretical Biology, 457: 37-50

Babst-Kostecka, Alicja; Schat, Henk; Saumitou-Laprade, Pierre; Grodzinska, Krystyna; Bourceaux, Angélique; Pauwels, Maxime; Frérot, Hélène (2018) Evolutionary dynamics of quantitative variation in an adaptive trait at the regional scale: The case of zinc hyperaccumulation in Arabidopsis halleri. Molecular Ecology, 27: 3257-3273

Belser, Caroline; Istace, Benjamin; Denis, Erwan; Dubarry, Marion; Baurens, Franc-Christophe; Falentin, Cyril; Genete, Mathieu; Berrabah, Wahiba; Chèvre, Anne-Marie; Delourme, Régine; Deniot, Gwenaëlle; Denoeud, France; Duffé, Philippe; Engelen, Stefan; Lemainque, Arnaud; Manzanares-Dauleux, Maria; Martin, Guillaume; Morice, Jérôme; Noel, Benjamin; Vekemans, Xavier; Hont, Angélique D; Rousseau-Gueutin, Mathieu; Barbe, Valérie; Cruaud, Corinne; Wincker, Patrick; Aury, Jean-Marc. (2018) Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps. Nature Plants, 4: 879-887

Blerot, Bernard; Martinelli, Laure; Prunier, Cécile; Saint-Marcoux, Denis; Legrand, Sylvain; Bony, Aurélie; Sarrabère, Loïc; Gros, Florence; Boyer, Nicolas; Caissard, Jean-Claude; Baudino, Sylvie; Jullien, Frédéric. (2018) Functional analysis of four terpene synthases in rose-scented pelargonium cultivars (Pelargonium x hybridum) and evolution of scent in the Pelargonium genus. Frontiers in Plant Science, 9: 1435

Bogo, Gherardo; de Manincor, Natasha; Fisogni, Alessandro; Galloni, Marta; Zavatta, Laura; Bortolotti, Laura. (2018) Different reproductive strategies and their possible relation to inbreeding risk in the bumble bee Bombus terrestris. Insectes Sociaux, 65: 289-295

Derocles, Stéphane A.P.; Bohan, David A.; Dumbrell, Alex J.; Kitson, James J.N.; Massol, François; Pauvert, Charlie; Plantegenest, Manuel; Vacher, Corinne; Evans, Darren M.. (2018) Biomonitoring for the 21st Century: Integrating Next-Generation Sequencing Into Ecological Network Analysis. Advances in Ecological Research, 58: 1-62

Fraïsse, Christelle; Roux, Camille; Gagnaire, Pierre-Alexandre; Romiguier, Jonathan; Faivre, Nicolas; Welch, John J.; Bierne, Nicolas. (2018) The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: the effects of sequencing techniques and sampling strategies. PeerJ, 6: e5198

Galtier, Nicolas; Roux, Camille; Rousselle, Marjolaine; Romiguier, Jonathan; Figuet, Emeric; Glémin, Sylvain; Bierne, Nicolas; Duret, Laurent. (2018) Codon Usage Bias in Animals: Disentangling the Effects of Natural Selection, Effective Population Size, and GC-Biased Gene Conversion. Molecular Biology and Evolution, 35: 1092-1103

Koffel, Thomas; Daufresne, Tanguy; Massol, François; Klausmeier, Christopher A.. (2018) Plant strategies along resource gradients. The American Naturalist, 192: 360-378

Li, Yangping; Colleoni, Christophe; Zhang, Junjie; Liang, Qiqi; Hu, Yufeng; Ruess, Holly; Simon, Reinhard; Liu, Yinghong; Liu, Hanmei; Yu, Guowu; Schmitt, Eric; Ponitzki, Chloé ; Liu, Guangjian; Huang, Huanhuan; Zhan, Feilong; Chen, Lin; Huang, Yubi; Spooner, David; Huang, Binquan. (2018) Genomic Analyses Yield Markers for Identifying Agronomically Important Genes in Potato. Molecular Plant, 11: 1-12

Merlin, Morgane; Duputié, Anne; Chuine, Isabelle. (2018) Limited validation of forecasted northward range shift in ten European tree species from a common garden experiment. Forest Ecology and Management, 410: 144-156

Meyer, Etienne H; Lehmann, Caroline; Boivin, Stéphane; Brings, Lea; De, Isabelle; Bock, Ralph; Kühn, Kristina; De Cauwer, Isabelle; Bock, Ralph; Kühn, Kristina; Touzet, Pascal (2018) CMS-G from Beta vulgaris ssp. maritima is maintained in natural populations despite containing an atypical cytochrome c oxidase. Biochemical Journal, 475: 759-773

Thomas, Frédéric; Donnadieu, Emmanuel; Charriere, Guillaume M; Jacqueline, Camille; Tasiemski, Aurélie; Pujol, Pascal; Renaud, François; Roche, Benjamin; Hamede, Rodrigo; Brown, Joel; Gatenby, Robert; Ujvari, Beata. (2018) Is adaptive therapy natural? ´. PLoS Biology, 16: e2007066

Van Rossum, Fabienne; Martin, Hélène; Le Cadre, Solenn; Brachi, Benjamin; Christenhusz, Maarten J M; Touzet, Pascal (2018) Phylogeography of a widely distributed species reveals a cryptic assemblage of distinct genetic lineages needing separate conservation strategies. Perspectives in Plant Ecology, Evolution and Systematics, 35: 44-51

Veltsos, Paris; Cossard, Guillaume; Beaudoing, Emmanuel; Beydon, Genséric; Savova Bianchi, Dessislava; Roux, Camille; González-Martínez, Santiago C. (2018) Size and content of the sex-determining region of the Y chromosome in dioecious Mercurialis annua, a plant with homomorphic sex chromosomes. Genes, 9: 277

Voillemot, M.; Rougemont, Q.; Roux, C; Pannell, J. R.. (2018) The divergence history of the perennial plant Linaria cavanillesii confirms a recent loss of self-incompatibility. Journal of Evolutionary Biology, 31: 136-147

Wang, Miaoyan; Roux, Fabrice; Bartolic, Claudia; Huard-Chauveauc, Carine; Meyere, Christopher; Lee, Hana; Roby, Dominique; McPeek, Mary Sara; Bergelson, Joy. (2018) Two-Way Mixed-Effects Methods for Joint Association Analysis Using Both Host and Pathogen Genomes. Proceedings of the National Academy of Sciences USA, 115: E5440-E5449

Zeppilli, Daniela; Leduc, Daniel; Fontanier, Christophe; Fontaneto, Diego; Fuchs, Sandra; Gooday, Andrew J.; Goineau, Aurélie; Ingels, Jeroen; Ivanenko, Viatcheslav N.; Kristensen, Reinhardt Møbjerg; Neves, Ricardo Cardoso; Sanchez, Nuria; Sandulli, Roberto; Sarrazin, Jozée; Sørensen, Martin V.; Tasiemski, Aurélie; Vanreusel, Ann; Autret, Marine; Bourdonnay, Louis; Claireaux, Marion; Coquillé, Valérie; de Wever, Lisa; Rachel, Durand; Marchant, James; Toomey, Lola; Fernandes, David. (2018) Characteristics of meiofauna in extreme marine ecosystems: a review. Marine Biodiversity, 48: 35-71

2017

Abu Awad, Diala; Billiard, Sylvain (2017) The double edged sword: The demographic consequences of the evolution of self-fertilization. Evolution, 71: 1178-1190

Amsellem, L; Brouat, C.; Duron, O.; Porter, S.S. S.; Vilcinskas, A.; Facon, B.. (2017) Importance of microorganisms to macroorganisms Invasions: Is the essential invisible to the eye? (The Little Prince, A. de Saint-Exupéry, 1943). Advances in Ecological Research, 57: 99-146

Billiard, Sylvain; Smadi, Charline. (2017) The interplay of two mutations in a population of varying size: a stochastic eco-evolutionary model for clonal interference. Stochastic Processes and their Applications, 127: 701-748

Delle-Vedove, Roxane; Schatz, Bertrand; Dufay, Mathilde (2017) Understanding intraspecific variation of floral scent in light of evolutionary ecology. Annals of Botany, 120: 1-20

Faucher, Leslie; Hénocq, Laura; Vanappelghem, Cédric; Rondel, Stéphanie; Quevillart, Robin; Gallina, Sophie; Godé, Cécile; Jaquiéry, Julie; Arnaud, Jean François (2017) When new human-modified habitats favour the expansion of an amphibian pioneer species: Evolutionary history of the natterjack toad (Bufo calamita) in a coal basin. Molecular Ecology, 26: 4434-4451

Faucher, Leslie; Hénocq, Laura; Vanappelghem, Cédric; Rondel, Stéphanie; Quevillart, Robin; Godé, Cécile; Arnaud, Jean-François (2017) Genetic structure of native and newly founded populations of the Natterjack Toad (Bufo calamita) in northern France. Herpetological Journal, 26: 2

Frachon, Léa; Libourel, Cyril; Villoutreix, Romain; Carrère, Sébastien; Glorieux, Cédric; Huard-Chauveau, Carine; Navascués, Miguel; Gay, Laurène; Vitalis, Renaud; Baron, Etienne; Amsellem, Laurent; Bouchez, Olivier; Vidal, Marie; Le Corre, Valérie; Roby, Dominique; Bergelson, Joy; Roux, Fabrice. (2017) Intermediate degrees of synergistic pleiotropy drive adaptive evolution in ecological time. Nature Ecology and Evolution, 1: 1551-1561

Gonneau, C; Noret, N; Godé, C; Kitt, J; Sirguey, C; Sterckeman, T; Koch, M A; Pauwels, M (2017) Design and validation of sixteen single nucleotide polymorphism to investigate plastid DNA sequence variation in Noccaea caerulescens (Brassicaceae). Conservation Genetics Resources, 9: 67-71

Gonneau, Cédric; Noret, Nausicaa; Godé, Cécile; Frérot, Hélène; Sirguey, Catherine; Sterckeman, Thibault; Pauwels, Maxime (2017) Demographic history of the trace metal hyperaccumulator Noccaea caerulescens (J. Presl and C. Presl) F. K. Mey. in Western Europe. Molecular Ecology, 26: 904-922

Martin, Hélène; Touzet, Pascal; Dufay, Mathilde; Godé, Cécile; Schmitt, Eric; Lahiani, Emna; Delph, Lynda F.; Van Rossum, Fabienne. (2017) Lineages of Silene nutans developed rapid, strong, asymmetric postzygotic reproductive isolation in allopatry. Evolution, 71: 1519-1531

Massol, F; Dubart, M; Calcagno, V; Cazelles, K; Jacquet, C; Kéfi, S; Gravel, D. (2017) Island biogeography of spatially structured food webs. Advances in Ecological Research, 56: 183-262

Massol, François; Altermatt, Florian; Gounand, Isabelle; Gravel, Dminique; Leibold, Mathew A.; Mouquet, Nicolas. (2017) How life-history traits affect ecosystem properties: effects of dispersal in meta-ecosystems. Oikos, 126: 532-546

Papot, Claire; Massol, François; Jollivet, Didier; Tasiemski, Aurélie (2017) Antagonistic evolution of an antibiotic and its molecular chaperone: how to maintain a vital ectosymbiosis in a highly fluctuating habitat. Scientific Reports, 7: 1454

Saumitou-Laprade, Pierre; Vernet, Philippe; Vekemans, Xavier; Billiard, Sylvain; Gallina, Sophie; Essalouh, Laila; Mhaïs, Ali; Moukhli, Abdelmajid; El Bakkali, Ahmed; Barcaccia, Gianni; Alagna, Fiammetta; Mariotti, Roberto; Cultrera, Nicolò G M; Pandolfi, Saverio; Rossi, Martina; Khadari, Bouchaïb; Baldoni, Luciana. (2017) Elucidation of the genetic architecture of self-incompatibility in olive: evolutionary consequences and perspectives for orchard management. Evolutionary Applications, nan: 1-14

Saumitou-Laprade, Pierre; Vernet, Philippe; Vekemans, Xavier; Castric, Vincent; Barcaccia, Gianni; Khadari, Bouchaïb; Baldoni, Luciana. (2017) Controlling for genetic identity of varieties, pollen contamination and stigma receptivity is essential to characterize the self-incompatibility system of Olea europaea L.. Evolutionary Applications, nan: 1-7

Tasiemski, Aurélie; Salzet, Michel. (2017) Neuro-immune lessons from an annelid: The medicinal leech. Developmental; Comparative Immunology, 66: 33-42

Arnal, Audrey; Jacqueline, Camille; Ujvari, Beata; Leger, Lucas; Moreno, Céline; Faugère, Dominique; Tasiemski, Aurélie; Boidin-Wichlacz, Céline; Missé, Dorothée; Renaud, François; Montagne, Jacques; Casali, Andreu; Roche, Benjamin; Mery, Frédéric; Thomas, Frédéric. (2017) Cancer brings forward oviposition in the fly Drosophila melanogaster. Ecology and Evolution, 7: 272-276

Astegiano, Julia; Altermatt, Florian; Massol, François (2017) Disentangling the co-structure of multilayer interaction networks: Degree distribution and module composition in two-layer bipartite networks. Scientific Reports, 7: 15465

Bogo, Gherardo; de Manincor, Natasha; Fisogni, Alessandro; Galloni, Marta; Bortolotti, Laura. (2017) Effects of queen mating status, pre-diapause weight and pupae’s sex on colony initiation in small-scale rearing of Bombus terrestris. Apidologie, 48: 845-854

Chantha, Sier Ching; Herman, Adam C.; Castric, Vincent; Vekemans, Xavier; Marande, William; Schoen, Daniel J.. (2017) The unusual S locus of Leavenworthia is composed of two sets of paralogous loci. New Phytologist, 216: 1247-1255

Charlery de la Masselière, Maud; Ravigné, Virginie; Facon, Benoît; Lefeuvre, Pierre; Massol, François; Quilici, Serge; Duyck, Pierre François. (2017) Changes in phytophagous insect host ranges following the invasion of their community: Long-term data for fruit flies. Ecology and Evolution, 7: 5181-5190

Dee, Laura E; Thompson, Ross; Massol, François; Guerrero, Angela; Bohan, David A. (2017) Do Social–Ecological Syndromes Predict Outcomes for Ecosystem Services? – a Reply to Bodin et al.. Trends in Ecology and Evolution, 32: 549-552

Dumoulin, D.; Billon, G.; Proix, N.; Frérot, H; Pauwels, M; Saumitou-Laprade, P (2017) Impact of a zinc processing factory on surrounding surficial soil contamination. Journal of Geochemical Exploration, 172: 142-150

Jacqueline, C; Tasiemski, A; Sorci, G; Ujvari, B; Maachi, F; Missé, D; Renaud, F; Ewald, P W; Thomas, F; Roche, B. (2017) “Infections and cancer: the “”fifty shades of immunity”” hypothesis.” BMC cancer, 17: 257

Jacqueline, Camille; Biro, Peter A.; Beckmann, Christa; Moller, Anders Pape; Renaud, François; Sorci, Gabriele; Tasiemski, Aurélie; Ujvari, Beata; Thomas, Frédéric. (2017) Cancer: A disease at the crossroads of trade-offs. Evolutionary Applications, 10: 215-225

Jacquot, Maxime; Tixier, Philippe; Flores, Olivier; Muru, David; Massol, François; Derepas, Brice; Chiroleu, Frédéric; Deguine, Jean-Philippe Philippe. (2017) Contrasting predation services of predator and omnivore diversity mediated by invasive ants in a tropical agroecosystem. Basic and Applied Ecology, 18: 31-39

Kamenova, S.; Bartley, T.J. J; Bohan, D.; Boutain, J.R. R; Colautti, R.I. I; Domaizon, I.; Fontaine, C.; Lemainque, A.; Le Viol, I.; Mollot, G.; Perga, M.-E.; Ravigné, V.; Massol, F. (2017) Invasions toolkit: Current methods for tracking the spread and impact of invasive species. Advances in Ecological Research, 56: 85-182

Lamy, Thomas; Laroche, Fabien; David, Patrice; Massol, François; Jarne, Philippe. (2017) The contribution of species –genetic diversity correlations to the understanding of community assembly rules. Oikos, 126: 759-771

Macke, Emilie; Tasiemski, Aurélie A; Massol, François; Callens, Martijn; Decaestecker, Ellen. (2017) Life history and eco-evolutionary dynamics in light of the gut microbiota. Oikos, 126: 508-531

Novikova, Polina Yu; Tsuchimatsu, Takashi; Simon, Samson; Nizhynska, Viktoria; Voronin, Viktor; Burns, Robin; Fedorenko, Olga M.; Holm, Svante; Säll, Torbjörn; Prat, Elisa; Marande, William; Castric, Vincent; Nordborg, Magnus; Irwin, David. (2017) Genome sequencing reveals the origin of the allotetraploid Arabidopsis suecica. Molecular Biology and Evolution, 34: 957-968

Pantel, Jelena H; Bohan, David A; Calcagno, Vincent; David, Patrice; Duyck, P.-F.; Kamenova, S; Loeuille, Nicolas; Mollot, Gregory; Romanuk, Tamara N; Thébault, Elisa; Tixier, Philippe; Massol, François (2017) 14 Questions for Invasion in Ecological Networks. Advances in Ecological Research, 56: 318-340

Poirotte, C; Massol, François; Herbert, Anaïs; Willaume, Eric; Bomo, Pacelle M.; Kappeler, Peter M.; Charpentier, Marie J. E.. (2017) Mandrills use olfaction to socially avoid parasitized conspecifics. Science Advances, 3: e1601721

Radersma, Reinder; Garroway, Colin J.; Santure, Anna W.; de Cauwer, Isabelle; Farine, Damien R.; Slate, Jon; Sheldon, Ben C.; Cauwer, Isabelle De; Garroway, Colin J.; Farine, Damien R.; Santure, Anna W.; Slate, Jon; Sheldon, Ben C.. (2017) Social and spatial effects on genetic variation between foraging flocks in a wild bird population. Molecular Ecology, 26: in press

Thomas, Frédéric; Ujvari, Beata; Gidoin, Cindy; Tasiemski, Aurélie; Ewald, Paul W; Roche, Benjamin. (2017) Toward an Ultimate Explanation of Intratumor Heterogeneity. Ecology and Evolution of Cancer, nan: 219-222

Tränkner, Conny; Pfeiffer, Nina; Kirchhoff, Martin; Kopisch-Obuch, Friedrich J.; van Dijk, Henk; Schilhabel, Markus; Hasler, Mario; Emrani, Nazgol. (2017) Deciphering the complex nature of bolting time regulation in Beta vulgaris. Theoretical and Applied Genetics, 130: 1649-1667

Tsuchimatsu, Takashi; Goubet, Pauline M; Gallina, Sophie; Holl, Anne Catherine; Fobis-Loisy, Isabelle; Berges, Hélene; Marande, William; Prat, Elisa; Meng, Dazhe; Long, Quan; Platzer, Alexander; Nordborg, Magnus; Vekemans, Xavier; Castric, Vincent (2017) Patterns of polymorphism at the self-incompatibility locus in 1,083 Arabidopsis thaliana genomes. Molecular Biology and Evolution, 34: 1878-1889

2016

Abu Awad, Diala; Billiard, Sylvain; Tran, Viet Chi. (2016) Perenniality induces high inbreeding depression in self-fertilising species. Theoretical Population Biology, 112: 43-51

Babst-Kostecka, Alicja A; Waldmann, Patrik; Frérot, Hélène; Vollenweider, Pierre. (2016) Plant adaptation to metal polluted environments—Physiological, morphological, and evolutionary insights from Biscutella laevigata. Environmental and Experimental Botany, 127: 1-13

Billiard, Sylvain; Collet, Pierre; Ferrière, Régis; Méléard, Sylvie; Tran, Viet Chi. (2016) The effect of competition and horizontal trait inheritance on invasion, fixation, and polymorphism. Journal of Theoretical Biology, 411: 48-58

Debieu, Marilyne; Huard-Chauveau, Carine; Genissel, Anne; Roux, Fabrice; Roby, Dominique. (2016) Quantitative disease resistance to the bacterial pathogen Xanthomonas campestris involves an Arabidopsis immune receptor pair and a gene of unknown function. Molecular Plant Pathology, 17: 510-520

Faucher, Leslie; Godé, Cécile; Arnaud, Jean-François (2016) Development of nuclear microsatellite loci and mitochondrial single nucleotide polymorphisms for the natterjack toad, Bufo (Epidalea) calamita (Bufonidae), using next generation sequencing and Competitive Allele Specific PCR (KASPar). Journal of Heredity, 107: 660-665

Goberville, Eric; Hautekèete, Nina-Coralie; Kirby, Richard R; Piquot, Yves; Luczak, Christophe; Beaugrand, Grégory. (2016) Climate change and the ash dieback crisis. Scientific Reports, 6: 35303

Martin, Hélène; Touzet, Pascal; Van Rossum, Fabienne; Delalande, D; Arnaud, J-F (2016) Phylogeographic pattern of range expansion provides evidence for cryptic species lineages in Silene nutans in Western Europe. Heredity, 116: 286-294

Papot, Claire; Cascella, Kévin; Toullec, Jean Yves; Jollivet, Didier. (2016) Divergent ecological histories of two sister Antarctic krill species led to contrasted patterns of genetic diversity in their heat-shock protein (hsp70) arsenal. Ecology and Evolution, 6: 1555-1575

Roux, Fabrice; Mary-Huard, Tristan; Barillot, Elise; Wenes, Estelle; Botran, Lucy; Durand, Stéphanie; Villoutreix, Romain; Martin-Magniette, Marie-Laure; Camilleri, Christine; Budar, Françoise. (2016) Cytonuclear interactions affect adaptive traits of the annual plant Arabidopsis thaliana in the field. Proceedings of the National Academy of Sciences of the United States of America, 113: 3687-3692

Souleman, Dima; Grumiaux, Fabien; Frérot, Hélène; Vandenbulcke, Franck; Pauwels, Maxime (2016) Isolation and characterization of eight polymorphic microsatellites markers for the earthworm Lumbricus terrestris. European Journal of Soil Biology, 74: 76-80

Vernet, Philippe; Lepercq, Pierre; Billiard, Sylvain; Bourceaux, Angelique; Lepart, Jacques; Dommée, Bertrand; Saumitou-Laprade, Pierre (2016) Evidence for the long-term maintenance of a rare self-incompatibility system in Oleaceae. The New Phytologist, 210: 1408-1417

Arnal, Audrey; Tissot, Tazzio; Ujvari, Beata; Nunney, Leonard; Solary, Eric; Laplane, Lucie; Bonhomme, François; Vittecoq, Marion; Tasiemski, Aurélie; Renaud, François; Pujol, Pascal; Roche, Benjamin; Thomas, Frédéric. (2016) The guardians of inherited oncogenic vulnerabilities. Evolution, 70: 1-6

Favre-Bac, Lisa; Mony, Cendrine; Ernoult, Aude; Burel, Françoise; Arnaud, Jean-François (2016) Ditch network sustains functional connectivity and influences patterns of gene flow in an intensive agricultural landscape. Heredity, 116: 200-212

Gracianne, Cécile; Jan, Pierre-Loup; Fournet, Sylvain; Olivier, Eric; Arnaud, Jean-François; Porte, Catherine; Bardou-Valette, Sylvie; Denis, Marie Christine; Petit, Eric J.. (2016) Temporal sampling helps unravel the genetic structure of naturally occurring populations of a phytoparasitic nematode. 2. Separating the relative effects of gene flow and genetic drift. Evolutionary Applications, 9: 1005-1016

Gravel, Dominique; Massol, François; Leibold, Mathew A.. (2016) Stability and complexity in model meta-ecosystems.. Nature Communications, 7: 12457

Jacquet, Claire; Moritz, Charlotte; Morissette, Lyne; Legagneux, Pierre; Massol, François; Archambault, Philippe; Gravel, Dominique. (2016) No complexity-stability relationship in empirical ecosystems. Nature Communications, 7: 12573

Jan, Pierre-Loup; Gracianne, Cécile; Fournet, Sylvain; Olivier, Eric; Arnaud, Jean-François; Porte, Catherine; Bardou-valette, Sylvie; Denis, Marie-Christine; Petit, Eric J.. (2016) Temporal sampling helps unravel the genetic structure of naturally occurring populations of a phytoparasitic nematode. 1. Insights from the estimation of effective population sizes. Evolutionary Applications, 9: 489-501

Koffel, Thomas; Daufresne, Tanguy; Massol, François; Klausmeier, Christopher A.. (2016) Geometrical envelopes: Extending graphical contemporary niche theory to communities and eco-evolutionary dynamics. Journal of Theoretical Biology, 407: 271-289

Laroche, Fabien; Jarne, Philippe; Perrot, Thomas; Massol, Francois (2016) The evolution of the competition– dispersal trade-off affects alpha- and beta-diversity in a heterogeneous metacommunity. Proceedings of the Royal Society B: Biological Sciences, 283: 20160548

Lenoir, Alain; Boulay, Raphaël; Dejean, Alain; Touchard, Axel; Cuvillier-Hot, Virginie (2016) Phthalate pollution in an Amazonian rainforest. Environmental Science and Pollution Research, nan: 16865-16872

Meyer, Claire Lise; Pauwels, Maxime; Briset, Loic; Godé, Cécile; Salis, Piétro; Bourceaux, Angélique; Souleman, Dima; Frérot, Hélène; Verbruggen, Nathalie. (2016) Potential preadaptation to anthropogenic pollution: Evidence from a common quantitative trait locus for zinc and cadmium tolerance in metallicolous and nonmetallicolous accessions of Arabidopsis halleri. New Phytologist, 212: 934-943

Poisot, Timothée; Baiser, Benjamin; Dunne, Jennifer A; Kéfi, Sonia; Massol, François; Mouquet, Nicolas; Romanuk, Tamara N; Stouffer, Daniel B; Wood, Spencer A; Gravel, Dominique. (2016) mangal – making ecological network analysis simple. Ecography, 39: 384-390

Sukhikh, Natalia; Souissi, Anissa; Souissi, Sami; Winkler, Gesche; Castric, Vincent; Holl, Anne-Catherine; Alekseev, Victor. (2016) Genetic and morphological heterogeneity among populations of Eurytemora affinis (Crustacea: Copepoda: Temoridae) in European waters. Comptes Rendus Biologies, 339: 197-206

The Quintessence Consortium. (2016) Networking our way to better ecosystem service provision. Trends in Ecology and Evolution, 31: 105-115

Tissot, Tazzio; Arnal, Audrey; Jacqueline, Camille; Poulin, Robert; Lefèvre, Thierry; Mery, Frédéric; Renaud, François; Roche, Benjamin; Massol, François; Salzet, Michel; Ewald, Paul; Tasiemski, Aurélie; Ujvari, Beata; Thomas, Frédéric. (2016) Host manipulation by cancer cells: Expectations, facts, and therapeutic implications. BioEssays, 38: 276-285

Ujvari, Beata; Beckmann, Christa; Biro, Peter A; Arnal, Audrey; Tasiemski, Aurélie; Massol, François; Salzet, Michel; Mery, Frédéric; Boidin-Wichlacz, Céline; Missé, Dorothée; Renaud, François; Vittecoq, Marion; Poulin, Robert; Thomas, Frédéric. (2016) Cancer and life-history traits: lessons from host–parasite interactions. Parasitology, 143: 533-541

Van Rossum, Fabienne; Weidema, Inger R; Martin, Hélène; Le Cadre, Solenn; Touzet, Pascal; Prentice, Honor C; Philipp, Marianne. (2016) The structure of allozyme variation in Silene nutans (Caryophyllaceae) in Denmark and in north-western Europe. Plant Systematics and Evolution, 302: 23-40

Wasowicz, Pawel; Pauwels, Maxime; Pasierbinski, Andrzej; Przedpelska-Wasowicz, Ewa M.; Babst-Kostecka, Alicja A; Saumitou-Laprade, Pierre; Rostanski, Adam. (2016) Phylogeography of Arabidopsis halleri (Brassicaceae) in mountain regions of Central Europe inferred from cpDNA variation and ecological niche modelling. PeerJ, 4: e1645

2015

Baron, Etienne; Richirt, Julien; Villoutreix, Romain; Amsellem, Laurent; Roux, Fabrice (2015) The genetics of intra- and interspecific competitive response and effect in a local population of an annual plant species. Functional Ecology, 29: 1361-1370

Billiard, Sylvain; Husse, Laetitia; Lepercq, Pierre; Godé, Cécile; Bourceaux, Angélique; Lepart, Jacques; Vernet, Phillipe; Saumitou-Laprade, Pierre (2015) Selfish male-determining element favors the transition from hermaphroditism to androdioecy. Evolution, 69: 683-693

Billiard, Sylvain; Ferrière, Régis; Méléard, Sylvie; Tran, Viet Chi. (2015) Stochastic dynamics of adaptive trait and neutral marker driven by eco-evolutionary feedbacks. Journal of Mathematical Biology, 71: 1211-1242

Brachi, Benjamin; Meyer, Christopher G; Villoutreix, Romain; Platt, Alexander; Morton, Timothy C; Roux, Fabrice (2015) Coselected genes determine adaptive variation in herbivore resistance throughout the native range of Arabidopsis thaliana. Proceedings of the National Academy of Sciences of the United States of America, 112: 4032-4037

Chantreau, Maxime; Chabbert, Brigitte; Billiard, Sylvain; Hawkins, Simon; Neutelings, Godfrey. (2015) Functional analyses of cellulose synthase genes in flax (Linum usitatissimum) by virus-induced gene silencing. Plant Biotechnology Journal, 13: 1312-1324

Duputié, Anne; Rutschmann, Alexis; Ronce, Ophélie; Chuine, Isabelle. (2015) Phenological plasticity will not help all species adapt to climate change. Global Change Biology, 21: 3062-3073

Goberville, Eric; Beaugrand, Grégory; Hautekèete, Nina-Coralie; Piquot, Yves; Luczak, Christophe. (2015) Uncertainties in the projection of species distributions related to general circulation models. Ecology and Evolution, 5: 1100-1116

Lahiani, Emna; Touzet, Pascal; Billard, Emmanuelle; Dufaÿ, Mathilde (2015) When is it worth being a self-compatible hermaphrodite? Context-dependent effects of self-pollination on female advantage in gynodioecious Silene nutans. Ecology and Evolution, 5: 1854-1862

Massol, François; Débarre, Florence. (2015) Evolution of dispersal in spatially and temporally variable environments: the importance of life cycles. Evolution, 69: 1925-1937

Poux, Céline; Gothland, Moâna; Holl, Anne-Catherine; Spilmont, Nicolas; Arnaud, Jean-François (2015) Highly polymorphic microsatellite markers in two species, the invasive shore crabs Hemigrapsus sanguineus and Hemigrapsus takanoi (Decapoda, Varunidae). Conservation Genetics Resources, 7: 569-572

Tasiemski, Aurélie; Massol, François; Cuvillier-Hot, Virginie; Boidin-Wichlacz, Céline; Roger, Emmanuel; Rodet, Franck; Fournier, Isabelle; Thomas, Frédéric; Salzet, Michel. (2015) Reciprocal immune benefit based on complementary production of antibiotics by the leech Hirudo verbana and its gut symbiont Aeromonas veronii. Scientific Reports, 5: 17498

Van de Paer, Céline; Saumitou-Laprade, Pierre; Vernet, Philippe; Billiard, Sylvain (2015) The joint evolution and maintenance of self-incompatibility with gynodioecy or androdioecy. Journal of Theoretical Biology, 371: 90-101

Voinson, Marina; Billiard, Sylvain; Alvergne, Alexandra. (2015) Beyond rational decision-making: Modelling the influence of cognitive biases on the dynamics of vaccination coverage. PLoS ONE, 10: e0142990

Astegiano, Julia; Massol, François; Vidal, Mariana Morais; Cheptou, Pierre-Olivier; Guimarães Jr, Paulo R. (2015) The robustness of plant-pollinator assemblages : linking plant interaction patterns and sensitivity to pollinator loss. PLoS ONE, nan: e0117243

Astegiano, Julia; Guimarães, Paulo R; Cheptou, Pierre-Olivier; Vidal, Mariana Morais; Mandai, Camila Yumi; Ashworth, Lorena; Massol, François (2015) Persistence of plants and pollinators in the face of habitat loss: Insights from trait-based metacommunity models. Advances in Ecological Research, 53: 201-257

Baliardini, Cecilia; Meyer, Claire-Lise; Salis, Pietrino; Saumitou-Laprade, Pierre; Verbruggen, Nathalie. (2015) CATION EXCHANGER1 cosegregates with cadmium tolerance in the metal hyperaccumulator Arabidopsis halleri and plays a role in limiting oxidative stress in Arabidopsis spp.. Plant Physiology, 169: 549-559

Bonin, Aurélie; Paris, Margot; Frérot, Hélène; Bianco, Erica; Tetreau, Guillaume; Després, Laurence. (2015) The genetic architecture of a complex trait: Resistance to multiple toxins produced by Bacillus thuringiensis israelensis in the dengue and yellow fever vector, the mosquito Aedes aegypti. Infection, Genetics and Evolution, 35: 204-213

Cascella, Kévin; Jollivet, Didier; Papot, Claire; Léger, Nelly; Corre, Erwan; Ravaux, Juliette; Clark, Melody S; Toullec, Jean Yves. (2015) Diversification, evolution and sub-functionalization of 70kDa heat-shock proteins in two sister species of antarctic krill: Differences in thermal habitats, responses and implications under climate change. PLoS ONE, 10: e0121642

Coomes, Oliver T; McGuire, Shawn J; Garine, Eric; Caillon, Sophie; McKey, Doyle; Demeulenaere, Elise; Jarvis, Devra; Aistara, Guntra; Barnaud, Adeline; Clouvel, Pascal; Emperaire, Laure; Louafi, Sélim; Martin, Pierre; Massol, François; Pautasso, Marco; Violon, Chloé; Wencélius, Jean. (2015) Farmer seed networks make a limited contribution to agriculture? Four common misconceptions. Food Policy, 56: 41-50

Gkika, Dimitra; Lemonnier, Loic; Shapovalov, George; Gordienko, Dmitri; Poux, Céline; Bernardini, Michela; Bokhobza, Alexandre; Bidaux, Gabriel; Degerny, Cindy; Verreman, Kathye; Guarmit, Basma; Benahmed, Mohamed; de Launoit, Yvan; Bindels, Rene J M; Pla, Alessandra Fiorio; Prevarskaya, Natalia. (2015) TRP channel–associated factors are a novel protein family that regulates TRPM8 trafficking and activity. The Journal of Cell Biology, 208: 89-107

Habarugira, Ildephonse; Hendriks, Theo; Quillet, Marie Christine; Hilbert, Jean Louis; Rambaud, Caroline. (2015) Effects of nuclear genomes on anther development in cytoplasmic male sterile chicories (Cichorium intybus L.): Morphological analysis. Scientific World Journal, nan: 529521

Hautekèete, Nina-Coralie Coralie; Frachon, Léa; Luczak, Christophe; Toussaint, Benoît Benoit; van Landuyt, Wouter; van Rossum, Fabienne; Piquot, Yves (2015) Habitat type shapes long-term plant biodiversity budgets in two densely populated regions in north-western Europe. Diversity and Distributions, 21: 631-642

Isaure, Marie-Pierre; Huguet, Stéphanie; Meyer, Claire-Lise; Castillo-Michel, H; Testemale, Denis; Vantelon, Denis; Saumitou-Laprade, Pierre; Verbruggen, Nathalie; Sarret, Géraldine. (2015) Evidence of various mechanisms of Cd sequestration in the hyperaccumalator Arabidopsis halleri, the non accumulator Arabidopsis lyrata and their progenies by combined synchrotron-based techniques. Journal of Experimental Botany, 66: 3201-3214

Laroche, Fabien; Jarne, Philippe; Lamy, Thomas; David, Patrice; Massol, Francois (2015) A neutral theory for interpreting correlations between species and genetic diversity in communities. The American Naturalist, 185: 59-69

Llaurens, Violaine; Joron, Mathieu; Billiard, Sylvain (2015) Molecular mechanisms of dominance evolution in Müllerian mimicry. Evolution, 69: 3097-3108

Lorenzo-Carballa, M Olalla; Ferreira, Sónia; Sims, Angela M; Thompson, David J; Watts, Phillip C; Cher, Yannick; Damoy, Vincent; Evrard, Aymeric; Gelez, William; Vanappelghem, Cédric (2015) Impact of landscape on spatial genetic structure and diversity of Coenagrion mercuriale (Zygoptera: Coenagrionidae) in northern France. Freshwater Science, 34: 1065-1078

Mouquet, Nicolas; Lagadeuc, Yvan; Devictor, Vincent; Doyen, Luc; Duputié, Anne; Eveillard, Damien; Faure, Denis; Garnier, Eric; Gimenez, Olivier; Huneman, Philippe; Jabot, Franck; Jarne, Philippe; Joly, Dominique; Julliard, Romain; Kéfi, Sonia; Kergoat, Gael J.; Lavorel, Sandra; Le Gall, Line; Meslin, Laurence; Morand, Serge; Morin, Xavier; Morlon, Hélène; Pinay, Gilles; Pradel, Roger; Schurr, Frank M.; Thuiller, Wilfried; Loreau, Michel. (2015) Predictive ecology in a changing world. Journal of Applied Ecology, 52: 1293-1310

Mousset, Mathilde; Flaven, Elodie; Justy, Fabienne; Pouzadoux, Juliette; Gode, Cécile; Pauwels, Maxime; Gonneau, Cédric (2015) Characterization and multiplexing of 21 microsatellite markers for the herb Noccaea caerulescens (Brassicaceae). Applications in Plant Sciences, 3: 1500052

Mulder, Christian; Bennett, Elena M.; Bohan, David A.; Bonkowski, Michael; Carpenter, Stephen R.; Chalmers, Rachel; Cramer, Wolfgang; Durance, Isabelle; Eisenhauer, Nico; Fontaine, Colin; Haughton, Alison J.; Hettelingh, Jean-Paul; Hines, Jes; Ibanez, Sébastien; Jeppesen, Erik; Krumins, Jennifer Adams; Ma, Athen; Mancinelli, Giorgio; Massol, François; McLaughlin, Órla; Naeem, Shahid; Pascual, Unai; Peñuelas, Josep; Pettorelli, Nathalie; Pocock, Michael J.O. O; Raffaelli, Dave; Rasmussen, Jes J.; Rusch, Graciela M.; Scherber, Christoph; Setälä, Heikki; Sutherland, William J.; Vacher, Corinne; Voigt, Winfried; Arie Vonk, J.; Wood, Stephen A.; Woodward, Guy. (2015) 10 years later: Revisiting priorities for science and society a decade after the Millennium Ecosystem Assessment. Advances in Ecological Research, 53: 1-53

Rodet, Franck; Tasiemski, Aurélie A; Van Camp, Christelle; Vuillaume, C; Slomianny, Christian; Salzet, Michel; Boidin-Wichlacz, Céline; Van Camp, Christelle; Vuillaume, C; Slomianny, Christian; Salzet, Michel. (2015) Hm-MyD88 and Hm-SARM : Two key regulators of the neuroimmune system and neural repair in the medicinal leech. Scientific Reports, 5: 9624

Saltré, Frédérik; Duputié, Anne; Gaucherel, Cédric; Chuine, Isabelle. (2015) How climate, migration ability and habitat fragmentation affect the projected future distribution of European beech. Global Change Biology, 21: 897-910

Santure, Anna W.; Poissant, Jocelyn; De Cauwer, Isabelle; Van Oers, Kees; Robinson, Matthew R.; Quinn, John L.; Groenen, Martien A.M.; Visser, Marcel E.; Sheldon, Ben C.; Slate, Jon. (2015) Replicated analysis of the genetic architecture of quantitative traits in two wild great tit populations. Molecular Ecology, 24: 6148-6162

Schmidt, Kenneth A; Johansson, Jacob; Kristensen, Nadiah; Massol, François; Jonzén, Niclas. (2015) Consequences of information use in breeding habitat selection on the evolution of settlement time. Oikos, 124: 69-80

Sepil, Irem; Radersma, Reinder; Santure, Anna W.; Cauwer, Isabelle De; Slate, Jon; Road, South Parks; Sciences, Plant; Zealand, New; Sepil, Irem; De Cauwer, Isabelle; Slate, Jon; Sheldon, Ben C.. (2015) No evidence for MHC class I based disassortative mating in a wild population of great tits. Journal of Evolutionary Biology, 28: 642-654

Thomas, Mathieu; Verzelen, Nicolas; Barbillon, Pierre; Coomes, Oliver T.; Caillon, Sophie; McKey, Doyle; Elias, Marianne; Garine, Eric; Raimond, Christine; Dounias, Edmond; Jarvis, Devra; Wencélius, Jean; Leclerc, Christian; Labeyrie, Vanesse; Cuong, Pham Hung; Hue, Nguyen Thi Ngoc; Sthapit, Bhuwon; Rana, Ram Bahadur; Barnaud, Adeline; Violon, Chloé; Reyes, Luis Manuel Arias; Moreno, Luis Latournerie; De Santis, Paola; Massol, François (2015) A Network-Based Method to Detect Patterns of Local Crop Biodiversity: Validation at the Species and Infra-Species Levels. Ecosystem Services: From Biodiversity to Society, 53: 259-320